Article
Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments
Gerhard M, Koussoroplis A, Raatz M, Pansch C, Fey SB, Vajedsamiei J, Calderó‐Pascual M, Cunillera‐Montcusí D, Juvigny‐Khenafou NPD, Polazzo F, Thomas PK, Symons CC, Beklio?lu M, Berger SA & Chefaoui RM (2023) Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments. Limnology and Oceanography Letters, 8 (2), pp. 247-266. https://doi.org/10.1002/lol2.10286
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Spoors F, James MA, Mendo T, McKnight JC, B?nnelycke ES & Khan N (2023) Investigating clove oil and its derivatives as anaesthetic agents for decapod crustaceans to improve welfare commercially and at slaughter. Frontiers in Animal Science, 4. https://doi.org/10.3389/fanim.2023.1180977
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The power of forecasts to advance ecological theory
Lewis ASL, Rollinson CR, Allyn AJ, Ashander J, Brodie S, Brookson CB, Collins E, Dietze MC, Gallinat AS, Juvigny‐Khenafou N, Koren G, McGlinn DJ, Moustahfid H, Peters JA & Record NR (2023) The power of forecasts to advance ecological theory. Methods in Ecology and Evolution, 14 (3), pp. 746-756. https://doi.org/10.1111/2041-210x.13955
Other
Ruiz Daniels R A versatile nuclei extraction protocol for single cell multiome ATAC and gene expression in non model species v1. Refers to: 10.17504/protocols.io.bp2l69wnrlqe/v1. PLoS ONE. https://doi.org/10.17504/protocols.io.bp2l69wnrlqe/v1
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Who Buys Surplus Meals? An Exploratory Survey in Danish Canteens
Pandey S, Budhathoki M, Feng K, Thomsen M & Reinbach HC (2023) Who Buys Surplus Meals? An Exploratory Survey in Danish Canteens. Foods, 12 (5), Art. No.: 1035. https://doi.org/10.3390/foods12051035
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Concerns and research priorities for Scottish farmed salmon welfare An industry perspective
Wiese T, Haskell M, Jarvis S, Planellas SR & Turnbull J (2023) Concerns and research priorities for Scottish farmed salmon welfare An industry perspective. Aquaculture, 566, Art. No.: 739235. https://doi.org/10.1016/j.aquaculture.2023.739235
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Bunting SW, Bostock J, Leschen W & Little DC (2023) Evaluating the potential of innovations across aquaculture product value chains for poverty alleviation in Bangladesh and India. Frontiers in Aquaculture, 2. https://www.frontiersin.org/articles/10.3389/faquc.2023.1111266/full; https://doi.org/10.3389/faquc.2023.1111266
Article
Applying genetic technologies to combat infectious diseases in aquaculture
Robinson NA, Robledo D, Sveen L, Ruiz Daniels R, Krasnov A, Coates A, Jin YH, Barrett LT, Lillehammer M, Kettunen AH, Phillips BL, Dempster T, Doeschl-Wilson A, Samsing F & Difford G (2023) Applying genetic technologies to combat infectious diseases in aquaculture. Reviews in Aquaculture, 15 (2), pp. 491-535. https://doi.org/10.1111/raq.12733
Article
Simpson MD, Marino A, de Maagt P, Gandini E, de Fockert A, Hunter P, Spyrakos E, Telfer T & Tyler A (2023) Investigating the Backscatter of Marine Plastic Litter Using a C- and X-Band Ground Radar, during a Measurement Campaign in Deltares. Remote Sensing, 15 (6), p. 1654. https://doi.org/10.3390/rs15061654
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Life Cycle Inventories of marine ingredients
Newton RW, Maiolo S, Malcorps W & Little DC (2023) Life Cycle Inventories of marine ingredients. Aquaculture, 565, Art. No.: 739096. https://doi.org/10.1016/j.aquaculture.2022.739096
Thesis
Stakeholder perceptions and sustainable intensification strategies for European aquaculture
Malcorps W (2023) Stakeholder perceptions and sustainable intensification strategies for European aquaculture. Doctor of Philosophy. 爱漫岛. http://hdl.handle.net/1893/35657
Article
Huyben D, Cronin T, Bartie KL, Matthew C, Sissener NH, Hundal BK, Homer NZM, Ruyter B & Glencross B (2023) Steroidogenic and innate immune responses in Atlantic salmon are influenced by dietary total lipid, long chain polyunsaturated fatty acids and dissolved oxygen. Aquaculture, 564, Art. No.: 739028. https://doi.org/10.1016/j.aquaculture.2022.739028
Article
Engineering plant-based feedstocks for sustainable aquaculture
Napier JA & Betancor MB (2023) Engineering plant-based feedstocks for sustainable aquaculture. Current Opinion in Plant Biology, 71, Art. No.: 102323. https://doi.org/10.1016/j.pbi.2022.102323
Article
Planning and licensing for marine aquaculture
Falconer L, Cutajar K, Krupandan A, Capuzzo E, Corner RA, Ellis T, Jeffery K, Mikkelsen E, Moore H, O'Beirn FX, O'Donohoe P, Ruane NM, Shilland R, Tett P & Telfer TC (2023) Planning and licensing for marine aquaculture. Reviews in Aquaculture. https://doi.org/10.1111/raq.12783
Article
Fish mortality associated to volcanic eruptions in the Canary Islands
Caballero MJ, José Perez-Torrado F, Velázquez-Wallraf A, Betancor MB, Fernandez A & Castro-Alonso A (2023) Fish mortality associated to volcanic eruptions in the Canary Islands. Frontiers in Marine Science, 9, Art. No.: 999816. https://doi.org/10.3389/fmars.2022.999816
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Wischhusen P, Betancor MB, Sprague M, Ortega A, de la Gándara F, Tocher DR & Mourente G (2023) Molecular Antioxidant Functions are Enhanced in Atlantic Bluefin Tuna (Thunnus Thynnus, L.) Larvae Fed Selenium Enriched Rotifers Brachionus Rotundiformis. Antioxidants, 12 (1), Art. No.: 26. https://doi.org/10.3390/antiox12010026
Article
Common microgeographical selection patterns revealed in four European conifers
Scotti I, Lalagüe H, Oddou‐Muratorio S, Scotti‐Saintagne C, Ruiz Daniels R, Grivet D, Lefevre F, Cubry P, Fady B, González‐Martínez SC, Roig A, Lesur‐Kupin I, Bagnoli F, Guerin V & Plomion C (2023) Common microgeographical selection patterns revealed in four European conifers. Molecular Ecology, 32 (2), pp. 393-411. https://doi.org/10.1111/mec.16750
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Three perspectives on the prediction of chemical effects in ecosystems
Schneeweiss A, Juvigny‐Khenafou NPD, Osakpolor S, Scharmüller A, Scheu S, Schreiner VC, Ashauer R, Escher BI, Leese F & Sch?fer RB (2023) Three perspectives on the prediction of chemical effects in ecosystems. Global Change Biology, 29 (1), pp. 21-40. https://doi.org/10.1111/gcb.16438
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Fehlinger L, Misteli B, Morant D, Juvigny-Khenafou N, Cunillera-Montcusí D, Chaguaceda F, Stamenkovi? O, Fahy J, Kolá? V, Halabowski D, Nash LN, Jakobsson E, Nava V, Tirozzi P & Urrutia Cordero P (2023) The ecological role of permanent ponds in Europe: a review of dietary linkages to terrestrial ecosystems via emerging insects. Inland Waters, 13 (1), pp. 30-46. https://doi.org/10.1080/20442041.2022.2111180
Book Chapter
Taylor RS, Daniels RR, Morata DP, Gundappa MK & Macqueen DJ (2022) Evolution of ray-finned fish genomes: Status and directions with a primer on microRNA characterization. In: Cellular and Molecular Approaches in Fish Biology. Amsterdam: Elsevier, pp. 309-346. https://doi.org/10.1016/b978-0-12-822273-7.00010-0
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Emam M, Caballero-Solares A, Xue X, Umasuthan N, Milligan B, Taylor RG, Balder R & Rise ML (2022) Gill and Liver Transcript Expression Changes Associated With Gill Damage in Atlantic Salmon (Salmo salar). Frontiers in Immunology, 13, Art. No.: 806484. https://doi.org/10.3389/fimmu.2022.806484
Book Chapter
Caballero-Solares A, Hall JR, Xue X & Rise ML (2022) Reverse Transcription-Quantitative Real-Time Polymerase Chain Reaction (RT-qPCR) for Gene Expression Analyses. In: Christian SL (ed.) Cancer Cell Biology. Methods in Molecular Biology, 2508. Springer US, pp. 319-340. https://doi.org/10.1007/978-1-0716-2376-3_21
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Exploiting animal personality to reduce chronic stress in captive fish populations
Prentice PM, Houslay TM & Wilson AJ (2022) Exploiting animal personality to reduce chronic stress in captive fish populations. Frontiers in Veterinary Science, 9, Art. No.: 1046205. https://doi.org/10.3389/fvets.2022.1046205
Review
Budhathoki M, Campbell D, Belton B, Newton R, Li S, Zhang W & Little D (2022) Factors Influencing Consumption Behaviour towards Aquatic Food among Asian Consumers: A Systematic Scoping Review. Foods, 11 (24), Art. No.: 4043. https://doi.org/10.3390/foods11244043
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Lambraki IA, Cousins M, Graells T, Léger A, Abdelrahman S, Desbois AP, Gallagher R, Staaf Larsson B, Mattson B, Henriksson P, Troell M, S?gaard J?rgensen P, Wernli D, Carson CA & Parmley EJ (2022) Governing Antimicrobial Resistance (AMR) in a Changing Climate: A Participatory Scenario Planning Approach Applied to Sweden in 2050. Frontiers in Public Health, 10, Art. No.: 831097. https://doi.org/10.3389/fpubh.2022.831097
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Betancor MB, Sprague M, González-Silvera D, Ortega A, de la Gándara F, Gong X, Napier JA, Tocher DR & Mourente G (2022) Oils Derived from GM Crops as Sustainable Solutions to the Supply of Long-Chain Omega-3 for On-Growing Atlantic Bluefin Tuna (Thunnus thynnus L.). Fishes, 7 (6), Art. No.: 366. https://doi.org/10.3390/fishes7060366
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Clokie BGJ, Elsheshtawy A, Albalat A, Nylund A, Beveridge A, Payne CJ & MacKenzie S (2022) Optimization of Low-Biomass Sample Collection and Quantitative PCR-Based Titration Impact 16S rRNA Microbiome Resolution. Microbiology Spectrum, 10 (6), Art. No.: e02255-22. https://doi.org/10.1128/spectrum.02255-22
Book Chapter
Evolution of sea louse (Copepoda: Caligidae) resistance against control agents
Sturm A, Tschesche C & Bron J (2022) Evolution of sea louse (Copepoda: Caligidae) resistance against control agents. In: Treasurer J, Bricknell I & Bron J (eds.) Sea Lice Biology and Control. Great Easton, UK: 5M Books, pp. 294-325. https://5mbooks.com/product/sea-lice-biology-and-control
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Syawal H, Kurniawan R, Effendi I & Austin B (2022) Fermented medicinal herbs improve hematological and physiological profile of Striped catfish (Pangasianodon hypophthalmus). F1000Research, 10, Art. No.: 466. https://doi.org/10.12688/f1000research.52640.3
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Whole genome sequences of 234 indigenous African chickens from Ethiopia
Gheyas A, Vallejo-Trujillo A, Kebede A, Dessie T, Hanotte O & Smith J (2022) Whole genome sequences of 234 indigenous African chickens from Ethiopia. Scientific Data, 9 (1), Art. No.: 53. https://doi.org/10.1038/s41597-022-01129-4
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Implication of adipocytes from subcutaneous adipose tissue and fatty
Carlos Campos-Sánchez J, Gonzalez-Silvera D, Gong X, Broughton R, Guardiola FA, Betancor MB & ?ngeles M (2022) Implication of adipocytes from subcutaneous adipose tissue and fatty. Fish and Shellfish Immunology, 131, pp. 160-171. https://doi.org/10.1016/j.fsi.2022.09.066
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Gebru G, Belay G, Vallejo-Trujillo A, Dessie T, Gheyas A & Hanotte O (2022) Ecological niche modelling as a tool to identify candidate indigenous chicken ecotypes of Tigray (Ethiopia). Frontiers in Genetics, 13, Art. No.: 968961. https://doi.org/10.3389/fgene.2022.968961
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CAPOT: A flexible rapid assessment model to estimate local deposition of fish cage farm wastes
Telfer TC, Bostock J, Oliver RLA, Corner RA & Falconer L (2022) CAPOT: A flexible rapid assessment model to estimate local deposition of fish cage farm wastes. Marine Environmental Research, 182, Art. No.: 105788. https://doi.org/10.1016/j.marenvres.2022.105788
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Falconer L, Telfer TC, Garrett A, Hermansen ?, Mikkelsen E, Hj?llo SS, McAdam BJ & Ytteborg E (2022) Insight into real-world complexities is required to enable effective response from the aquaculture sector to climate change. PLOS Climate, 1 (3), Art. No.: e0000017. https://doi.org/10.1371/journal.pclm.0000017
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Saito T, Whatmore P, Taylor JF, Fernandes JMO, Adam A, Tocher DR, Espe M & Skjaerven KH (2022) Micronutrient supplementation affects DNA methylation in male gonads with potential intergenerational epigenetic inheritance involving the embryonic development through glutamate receptor-associated genes. BMC Genomics, 23 (1), Art. No.: 115. https://doi.org/10.1186/s12864-022-08348-4
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Lambraki IA, Cousins M, Graells T, Leger A, Henriksson P, Harbarth S, Troell M, Wernli D, J?rgensen PS, Desbois AP, Carson CA, Parmley EJ & Majowicz SE (2022) Factors influencing antimicrobial resistance in the European food system and potential leverage points for intervention: A participatory, One Health study. PLoS ONE, 17 (2), Art. No.: e0263914. https://doi.org/10.1371/journal.pone.0263914
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Weidmann M, Graf E, Lichterfeld D, Abd El Wahed A & Bekaert M (2022) Efficient Screening of Long Oligonucleotides Against Hundred Thousands of SARS-CoV-2 Genome Sequences. Frontiers in Virology, 2, Art. No.: 835707. https://doi.org/10.3389/fviro.2022.835707
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Use of Poultry By-product and Plant Protein Sources in Diets of Redclaw (Cherax quadricarinatus)
Eroldogan OT, Elsabagh M, Sevgili H, Glencross B, Paolucci M, Kumlu M, Kinay E, Evliyaoglu E, Yilmaz HA & Sanibek M (2022) Use of Poultry By-product and Plant Protein Sources in Diets of Redclaw (Cherax quadricarinatus). Turkish Journal of Fisheries and Aquatic Sciences, 22 (8), Art. No.: TRJFAS21188. https://doi.org/10.4194/trjfas21188
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Shrivastav AK, Kumar G, Mittal P, Tocher DR, Glencross BD, Chakrabarti R & Sharma J (2022) Effect of Greater Duckweed Spirodela polyrhiza Supplemented Feed on Growth Performance, Digestive Enzymes, Amino and Fatty Acid Profiles, and Expression of Genes Involved in Fatty Acid Biosynthesis of Juvenile Common Carp Cyprinus carpio. Frontiers in Marine Science, 9, Art. No.: 788455. https://doi.org/10.3389/fmars.2022.788455
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Wang J, Pang H, Yin L, Zeng F, Wang N, Hoare R, Monaghan SJ, Li W & Jian J (2022) A Comprehensive Analysis of the Lysine Acetylome in the Aquatic Animals Pathogenic Bacterium Vibrio mimicus. Frontiers in Microbiology, 13, Art. No.: 816968. https://doi.org/10.3389/fmicb.2022.816968
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Chen S, Shi C, Migaud H, Song C, Mu C, Ye Y, Wang C & Ren Z (2022) Light Spectrum Impacts on Growth, Molting, and Oxidative Stress Response of the Mud Crab Scylla paramamosain. Frontiers in Marine Science, 9, Art. No.: 840353. https://doi.org/10.3389/fmars.2022.840353
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Welfare in farmed decapod crustaceans, with particular reference to Penaeus vannamei
Albalat A, Zacarias S, Coates CJ, Neil DM & Rey Planellas S (2022) Welfare in farmed decapod crustaceans, with particular reference to Penaeus vannamei. Frontiers in Marine Science, 9, Art. No.: 886024. https://doi.org/10.3389/fmars.2022.886024
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Goswami RK, Sharma J, Shrivastav AK, Kumar G, Glencross BD, Tocher DR & Chakrabarti R (2022) Effect of Lemna minor supplemented diets on growth, digestive physiology and expression of fatty acids biosynthesis genes of Cyprinus carpio. Scientific Reports, 12, Art. No.: 3711. https://doi.org/10.1038/s41598-022-07743-x
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Establishment of a fish model to study gas-bubble lesions
Velázquez-Wallraf A, Fernández A, Caballero MJ, Arregui M, González Díaz ?, Betancor MB & Bernaldo de Quirós Y (2022) Establishment of a fish model to study gas-bubble lesions. Scientific Reports, 12, Art. No.: 6592. https://doi.org/10.1038/s41598-022-10539-8
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Evidence of multiple genome duplication events in Mytilus evolution
Corrochano-Fraile A, Davie A, Carboni S & Bekaert M (2022) Evidence of multiple genome duplication events in Mytilus evolution. BMC Genomics, 23 (1), Art. No.: 340. https://doi.org/10.1186/s12864-022-08575-9
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Kumar G, Sharma J, Goswami RK, Shrivastav AK, Tocher DR, Kumar N & Chakrabarti R (2022) Freshwater Macrophytes: A Potential Source of Minerals and Fatty Acids for Fish, Poultry, and Livestock. Frontiers in Nutrition, 9, Art. No.: 869425. https://doi.org/10.3389/fnut.2022.869425
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Tschesche C, Bekaert M, Bassett DI, Boyd S, Bron JE & Sturm A (2022) Key role of mitochondrial mutation Leu107Ser (COX1) in deltamethrin resistance in salmon lice (Lepeophtheirus salmonis). Scientific Reports, 12 (1), Art. No.: 10356. https://doi.org/10.1038/s41598-022-14023-1
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Neil DM, Albalat A & Thompson J (2022) The effects of electrical stunning on the nervous activity and physiological stress response of a commercially important decapod crustacean, the brown crab Cancer pagurus L.. PLOS ONE, 17 (7), Art. No.: e0270960. https://doi.org/10.1371/journal.pone.0270960
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Seafood in Food Security: A Call for Bridging the Terrestrial-Aquatic Divide
Stetkiewicz S, Norman RA, Allison EH, Coffee P, Crumlish M, Eltholth M, Falconer L, Kaminski AM, Leschen W, McAdam B, Newton R, Pounds A, Schapper A, Young JA & Little DC (2022) Seafood in Food Security: A Call for Bridging the Terrestrial-Aquatic Divide. Frontiers in Sustainable Food Systems, 5, Art. No.: 703152. https://doi.org/10.3389/fsufs.2021.703152
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Aquaculture will continue to depend more on land than sea
Zhang W, Belton B, Edwards P, Henriksson PJ, Little DC, Newton R & Troell M (2022) Aquaculture will continue to depend more on land than sea. Nature, 603, pp. E2-E4. https://doi.org/10.1038/s41586-021-04331-3
Article
The Complex Influences on How We Care for Farmed Fish
Turnbull JF (2022) The Complex Influences on How We Care for Farmed Fish. Frontiers in Veterinary Science, 8, Art. No.: 765797. https://doi.org/10.3389/fvets.2021.765797
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Chen X, He Z, Zhao J, Liao M, Xue Y, Zhou J, Hoare R, Monaghan SJ, Wang N, Pang H & Sun C (2022) Metagenomic Analysis of Bacterial Communities and Antibiotic Resistance Genes in Penaeus monodon Biofloc-Based Aquaculture Environments. Frontiers in Marine Science, 8, Art. No.: 762345. https://doi.org/10.3389/fmars.2021.762345
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Elmagzoub WA, Idris SM, Isameldin M, Arabi N, Abdo A, Ibrahim M, Khan MAA, Tanneberger F, Bakhiet SM, Okuni JB, Ojok L, Gameel AA, Abd El Wahed A, Bekaert M & Mukhtar ME (2022) Mycobacterium avium subsp. paratuberculosis and microbiome profile of patients in a referral gastrointestinal diseases centre in the Sudan. PLoS ONE, 17 (4), Art. No.: e0266533. https://doi.org/10.1371/journal.pone.0266533
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Murray FJ & Little DC (2022) Rural Consumer Preferences for Inland Fish and Their Substitutes in the Dry-Zone of Sri Lanka and Implications for Aquaculture Development. Frontiers in Sustainable Food Systems, 6, Art. No.: 867701. https://doi.org/10.3389/fsufs.2022.867701